Version 5.4
Homo sapiens Gene: VPS13C
Summary
InnateDB Gene IDBG-15037.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol VPS13C
Gene Name vacuolar protein sorting 13 homolog C (S. cerevisiae)
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000129003
Encoded Proteins
IDBP-15039
vacuolar protein sorting 13 homolog C (S. cerevisiae)
IDBP-15041
vacuolar protein sorting 13 homolog C (S. cerevisiae)
IDBP-238414
vacuolar protein sorting 13 homolog C (S. cerevisiae)
IDBP-238416
vacuolar protein sorting 13 homolog C (S. cerevisiae)
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene encodes a member of the vacuolar protein sorting-associated 13 gene family. Alternate splicing results in multiple transcript variants. [provided by RefSeq, Oct 2010]
Gene Information
Type Protein coding
Genomic Location Chromosome 15:61852389-62060473
Strand Reverse strand
Band q22.2
Transcripts
ENST00000261517 ENSP00000261517
ENST00000249837 ENSP00000249837
ENST00000395898 ENSP00000379235
ENST00000395896 ENSP00000379233
ENST00000560637
ENST00000559119
ENST00000558919
ENST00000558338
ENST00000558088
ENST00000561258
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 1 experimentally validated interaction(s) in this database.
They are also associated with 1 interaction(s) predicted by orthology.
Experimentally validated
Total 1 [view]
Protein-Protein 1 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 1 [view]
Gene Ontology

Molecular Function
Accession GO Term
Biological Process
Cellular Component
GO:0070062 extracellular vesicular exosome
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000035284
View Gene Order
ENSBTAG00000038920
Not yet available
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Hs.511668 Hs.611179 Hs.707691 Hs.717870
RefSeq NM_001018088 NM_017684 NM_018080 NM_020821
HUGO
OMIM
CCDS CCDS10180 CCDS32257 CCDS45272 CCDS58367
HPRD 12323
IMGT
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca