InnateDB incorporates transcription factor binding site (TFBS) data from the CisRED database for human and mouse
Users can analyse a list of genes to determine whether particular TFBSs are over-represented in their dataset based on this data.
To do a TFBS Analysis, first upload a tab-delimited text file or Excel spreadsheet (.xls files only) of gene/protein identifiers (human or mouse only). Please see our help page if you are unsure how to do this and to see what IDs are accepted.
Once you have a list of TFBSs associated with your gene/protein list - click on the "TF ORA" button at the top of the page.