Version 5.4
Mus musculus Gene: Vps13c
Summary
InnateDB Gene IDBG-180869.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Vps13c
Gene Name vacuolar protein sorting 13C (yeast)
Synonyms
Species Mus musculus
Ensembl Gene ENSMUSG00000035284
Encoded Proteins
IDBP-180873
vacuolar protein sorting 13C (yeast)
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000129003:
This gene encodes a member of the vacuolar protein sorting-associated 13 gene family. Alternate splicing results in multiple transcript variants. [provided by RefSeq, Oct 2010]
Gene Information
Type Protein coding
Genomic Location Chromosome 9:67840396-67995634
Strand Forward strand
Band C
Transcripts
ENSMUST00000077879 ENSMUSP00000077040
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 2 experimentally validated interaction(s) in this database.
They are also associated with 1 interaction(s) predicted by orthology.
Experimentally validated
Total 2 [view]
Protein-Protein 2 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 1 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003674 molecular_function
Biological Process
GO:0008150 biological_process
Cellular Component
GO:0070062 extracellular vesicular exosome
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000129003
View Gene Order
ENSBTAG00000038920
Not yet available
Cross-References
SwissProt Q8BX70
TrEMBL A1ILG8 A1ILG9 A1ILH0 A1ILH3
UniProt Splice Variant
Entrez Gene 320528
UniGene Mm.241454
RefSeq NM_177184 XM_006511224 XM_006511225 XM_006511226 XM_006511227 XM_006511228
OMIM
CCDS CCDS40676
HPRD
IMGT
MGI ID MGI:2444207
MGI Symbol Vps13c
EMBL AB281675 AB281676 AB281677 AB281686 AC156799 AK030931 AK045749 AK048766 AK049557 AK129486
GenPept BAC32479 BAC33451 BAC33809 BAC98296 BAE20465 BAF44195 BAF44196 BAF44197 BAF44200
RNA Seq Atlas 320528

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca