Version 5.4
Bos taurus Gene: BT.88439
Summary
InnateDB Gene IDBG-631760.3
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol BT.88439
Gene Name enhancer of mRNA-decapping protein 3
Synonyms LSM16
Species Bos taurus
Ensembl Gene ENSBTAG00000007308
Encoded Proteins
IDBP-683337
enhancer of mRNA-decapping protein 3
IDBP-683341
enhancer of mRNA-decapping protein 3
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000179151:
EDC3 is associated with an mRNA-decapping complex required for removal of the 5-prime cap from mRNA prior to its degradation from the 5-prime end (Fenger-Gron et al., 2005 [PubMed 16364915]).[supplied by OMIM, Mar 2008]
Gene Information
Type Protein coding
Genomic Location Chromosome 21:34382785-34435709
Strand Forward strand
Band
Transcripts
ENSBTAT00000009613 ENSBTAP00000009613
ENSBTAT00000038729 ENSBTAP00000038539
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 14 interaction(s) predicted by orthology.
Predicted by orthology
Total 14 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0005515 protein binding
GO:0042802 identical protein binding
Biological Process
Cellular Component
GO:0016020 membrane
Orthologs
Species
Homo sapiens
Mus musculus
Gene ID
Gene Order
ENSG00000179151
View Gene Order
ENSMUSG00000038957
View Gene Order
Pathway Predictions based on Human Orthology Data
NETPATH
REACTOME
REACT_20518
mRNA decay by 5' to 3' exoribonuclease pathway
REACT_20639
Deadenylation-dependent mRNA decay pathway
REACT_71
Gene Expression pathway
REACT_261877
mRNA decay by 5' to 3' exoribonuclease pathway
REACT_233572
Gene Expression pathway
REACT_235784
Deadenylation-dependent mRNA decay pathway
KEGG
hsa03018
RNA degradation pathway
mmu03018
RNA degradation pathway
INOH
PID NCI
Cross-References
SwissProt
TrEMBL E1BEA2
UniProt Splice Variant
Entrez Gene 517979
UniGene Bt.88439
RefSeq XM_005221958 XM_005221959 NM_001031758
HUGO
OMIM
CCDS
HPRD
IMGT
EMBL DAAA02052498 DAAA02052499 DAAA02052500
GenPept
RNA Seq Atlas 517979

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca