InnateDB: Systems Biology of the Innate Immune Response

Mus musculus Protein: Tlr7

Summary

InnateDB Protein

IDBP-185534.6

Last Modified

2014-10-13 [Report errors or provide feedback]

Gene Symbol

Tlr7

Protein Name

toll-like receptor 7

Synonyms

Species

Mus musculus

Ensembl Protein

ENSMUSP00000061853

InnateDB Gene

IDBG-185532 (Tlr7)

Protein Structure

UniProt Annotation

Function

Key component of innate and adaptive immunity. TLRs (Toll-like receptors) control host immune response against pathogens through recognition of molecular patterns specific to microorganisms. TLR7 is a nucleotide-sensing TLR which is activated by single-stranded RNA. Acts via MYD88 and TRAF6, leading to NF-kappa-B activation, cytokine secretion and the inflammatory response. {ECO:0000269PubMed:14976261}.

Subcellular Localization

Endoplasmic reticulum membrane {ECO:0000269PubMed:18305481}; Single-pass type I membrane protein {ECO:0000269PubMed:18305481}. Endosome {ECO:0000269PubMed:18305481}. Lysosome {ECO:0000269PubMed:18305481}. Cytoplasmic vesicle, phagosome {ECO:0000269PubMed:18305481}. Note=Relocalizes from endoplasmic reticulum to endosome and lysosome upon stimulation with agonist.

Disease Associations

Tissue Specificity

Comments

Interactions

Number of Interactions

This gene and/or its encoded proteins are associated with 6 experimentally validated interaction(s) in this database.
They are also associated with 5 interaction(s) predicted by orthology.

Experimentally validated
Total	6 [view]
Protein-Protein	6 [view]
Protein-DNA	0
Protein-RNA	0
DNA-DNA	0
RNA-RNA	0
DNA-RNA	0

Predicted by orthology
Total	5 [view]

Gene Ontology

Molecular Function

Accession	GO Term
GO:0003725	double-stranded RNA binding
GO:0003727	single-stranded RNA binding
GO:0004888	transmembrane signaling receptor activity
GO:0005515	protein binding
GO:0008144	drug binding
GO:0035197	siRNA binding

Biological Process

GO:0001774	microglial cell activation
GO:0002224	toll-like receptor signaling pathway
GO:0002282	microglial cell activation involved in immune response
GO:0002755	MyD88-dependent toll-like receptor signaling pathway
GO:0006954	inflammatory response
GO:0007165	signal transduction
GO:0007252	I-kappaB phosphorylation
GO:0032722	positive regulation of chemokine production
GO:0032755	positive regulation of interleukin-6 production
GO:0032757	positive regulation of interleukin-8 production
GO:0034154	toll-like receptor 7 signaling pathway
GO:0042346	positive regulation of NF-kappaB import into nucleus
GO:0045078	positive regulation of interferon-gamma biosynthetic process
GO:0045087	innate immune response (InnateDB)
GO:0045356	positive regulation of interferon-alpha biosynthetic process
GO:0045359	positive regulation of interferon-beta biosynthetic process
GO:0045416	positive regulation of interleukin-8 biosynthetic process
GO:0051607	defense response to virus
GO:0052033	pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response
GO:0071260	cellular response to mechanical stimulus

Cellular Component

GO:0005737	cytoplasm
GO:0005764	lysosome
GO:0005768	endosome
GO:0005783	endoplasmic reticulum
GO:0005789	endoplasmic reticulum membrane
GO:0005886	plasma membrane
GO:0016021	integral component of membrane
GO:0032009	early phagosome
GO:0043235	receptor complex

Protein Structure and Domains

PDB ID

MGI:2176882

InterPro

IPR000157 Toll/interleukin-1 receptor homology (TIR) domain
IPR000483 Cysteine-rich flanking region, C-terminal
IPR001611 Leucine-rich repeat
IPR003591 Leucine-rich repeat, typical subtype

PFAM

PF01582
PF13676
PF01463
PF00560
PF13504
PF13855

PRINTS

PIRSF

SMART

SM00255
SM00082
SM00369

TIGRFAMs

Post-translational Modifications

Modification

Cross-References

SwissProt

P58681