Version 5.4
Homo sapiens Gene: TRAPPC10
Summary
InnateDB Gene IDBG-4967.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol TRAPPC10
Gene Name trafficking protein particle complex 10
Synonyms EHOC-1; EHOC1; GT334; TMEM1; TRS130; TRS30
Species Homo sapiens
Ensembl Gene ENSG00000160218
Encoded Proteins
IDBP-4969
trafficking protein particle complex 10
IDBP-4971
trafficking protein particle complex 10
IDBP-369586
trafficking protein particle complex 10
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary The protein encoded by this gene is a transmembrane protein found in the cis-Golgi complex. The encoded protein is part of the multisubunit transport protein particle (TRAPP) complex and may be involved in vesicular transport from the endoplasmic reticulum to the Golgi. Mutations in this gene could be responsible for the Unverricht-Lundborg type of progressive myoclonus epilepsy, or for autoimmune polyglandular disease type 1. [provided by RefSeq, Jul 2008]
Gene Information
Type Protein coding
Genomic Location Chromosome 21:44012319-44106552
Strand Forward strand
Band q22.3
Transcripts
ENST00000291574 ENSP00000291574
ENST00000380221 ENSP00000369570
ENST00000422875 ENSP00000402221
ENST00000481460
ENST00000461889
ENST00000459741
ENST00000465905
ENST00000483973
ENST00000486746
ENST00000469521
ENST00000485621
ENST00000468864
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 21 experimentally validated interaction(s) in this database.
Experimentally validated
Total 21 [view]
Protein-Protein 20 [view]
Protein-DNA 1 [view]
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0005515 protein binding
GO:0015081 sodium ion transmembrane transporter activity
Biological Process
GO:0006814 sodium ion transport
GO:0016192 vesicle-mediated transport
GO:0035725 sodium ion transmembrane transport
Cellular Component
GO:0005794 Golgi apparatus
GO:0016021 integral component of membrane
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000000374
View Gene Order
ENSBTAG00000007100
Not yet available
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Hs.126221 Hs.594092 Hs.713896
RefSeq NM_003274 XM_006724046 XM_006724047
HUGO
OMIM
CCDS CCDS13704
HPRD 03656
IMGT
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca