Version 5.4
Mus musculus Protein: Tdp1
Summary
InnateDB Protein IDBP-537810.3
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Tdp1
Protein Name tyrosyl-DNA phosphodiesterase 1
Synonyms 2810481F14Rik; 4921509N21Rik; AI838772; AW493413; E430034L06Rik; MLZ-501; SCAN1;
Species Mus musculus
Ensembl Protein ENSMUSP00000118656
InnateDB Gene IDBG-163560 (Tdp1)
Protein Structure
UniProt Annotation
Function
Subcellular Localization
Disease Associations
Tissue Specificity
Comments
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 6 interaction(s) predicted by orthology.
Predicted by orthology
Total 6 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003690 double-stranded DNA binding
GO:0003697 single-stranded DNA binding
GO:0005515 protein binding
GO:0008081 phosphoric diester hydrolase activity
GO:0017005 3'-tyrosyl-DNA phosphodiesterase activity
Biological Process
GO:0000012 single strand break repair
GO:0006281 DNA repair
GO:0006302 double-strand break repair
Cellular Component
GO:0005634 nucleus
GO:0005737 cytoplasm
Protein Structure and Domains
PDB ID MGI:1920036
InterPro IPR010347 Tyrosyl-DNA phosphodiesterase I
PFAM PF06087
PRINTS
PIRSF
SMART
TIGRFAMs
Post-translational Modifications
Modification
Cross-References
SwissProt
PhosphoSite PhosphoSite-
TrEMBL D3Z075
UniProt Splice Variant
Entrez Gene 104884
UniGene Mm.312323
RefSeq NP_082630
MGI ID
MGI Symbol Tdp1
OMIM
CCDS CCDS26105
HPRD
IMGT
EMBL AC160931 CH466549 CT010436
GenPept EDL18908

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca