Version 5.4
Homo sapiens Gene: C22orf28
Summary
InnateDB Gene IDBG-5110.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol C22orf28
Gene Name chromosome 22 open reading frame 28
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000100220
Encoded Proteins
IDBP-5112
chromosome 22 open reading frame 28
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 22:32387582-32412255
Strand Reverse strand
Band q12.3
Transcripts
ENST00000216038 ENSP00000216038
ENST00000498434
ENST00000476619
ENST00000485373
ENST00000487704
ENST00000463455
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 50 experimentally validated interaction(s) in this database.
They are also associated with 2 interaction(s) predicted by orthology.
Experimentally validated
Total 50 [view]
Protein-Protein 49 [view]
Protein-DNA 1 [view]
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 2 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003972 RNA ligase (ATP) activity
GO:0005524 ATP binding
GO:0008452 RNA ligase activity
GO:0017166 vinculin binding
GO:0044822 poly(A) RNA binding
GO:0046872 metal ion binding
Biological Process
GO:0001701 in utero embryonic development
GO:0001890 placenta development
GO:0006388 tRNA splicing, via endonucleolytic cleavage and ligation
GO:0006396 RNA processing
Cellular Component
GO:0005737 cytoplasm
GO:0072669 tRNA-splicing ligase complex
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000001783
View Gene Order
ENSBTAG00000011070
Not yet available
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Hs.474643
RefSeq NM_014306
HUGO
OMIM
CCDS CCDS13905
HPRD 13695
IMGT
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca