Homo sapiens Gene: TNRC6B
Summary
InnateDB Gene IDBG-8635.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol TNRC6B
Gene Name trinucleotide repeat containing 6B
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000100354
Encoded Proteins
trinucleotide repeat containing 6B
trinucleotide repeat containing 6B
trinucleotide repeat containing 6B
trinucleotide repeat containing 6B
trinucleotide repeat containing 6B
trinucleotide repeat containing 6B
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 22:40044817-40335808
Strand Forward strand
Band q13.1
Transcripts
ENST00000301923 ENSP00000306759
ENST00000335727 ENSP00000338371
ENST00000402203 ENSP00000384795
ENST00000454349 ENSP00000401946
ENST00000441751 ENSP00000397491
ENST00000446273 ENSP00000409429
ENST00000489500
ENST00000497559
ENST00000467658
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 43 experimentally validated interaction(s) in this database.
They are also associated with 1 interaction(s) predicted by orthology.
Experimentally validated
Total 43 [view]
Protein-Protein 43 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 1 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0000166 nucleotide binding
GO:0005515 protein binding
GO:0044822 poly(A) RNA binding
Biological Process
GO:0006417 regulation of translation
GO:0007173 epidermal growth factor receptor signaling pathway
GO:0007219 Notch signaling pathway
GO:0008543 fibroblast growth factor receptor signaling pathway
GO:0010467 gene expression
GO:0031047 gene silencing by RNA
GO:0038095 Fc-epsilon receptor signaling pathway
GO:0045087 innate immune response
GO:0048011 neurotrophin TRK receptor signaling pathway
GO:0048015 phosphatidylinositol-mediated signaling
GO:0060213 positive regulation of nuclear-transcribed mRNA poly(A) tail shortening
GO:1900153 positive regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay
Cellular Component
GO:0000932 cytoplasmic mRNA processing body
GO:0005829 cytosol
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
Method
Confidence
Comments
SSD Ortholog
Ortholog supports species divergence
Not yet available
SSD Ortholog
Ortholog supports species divergence
Pathways
NETPATH
REACTOME
Signaling by FGFR in disease pathway
Cellular responses to stress pathway
Oncogene Induced Senescence pathway
Signalling by NGF pathway
Signaling by EGFR in Cancer pathway
PI3K/AKT activation pathway
Downstream signaling of activated FGFR pathway
Ca2+ pathway pathway
Pre-NOTCH Expression and Processing pathway
beta-catenin independent WNT signaling pathway
PI-3K cascade pathway
PI3K events in ERBB2 signaling pathway
DAP12 signaling pathway
Signaling by Wnt pathway
Signaling by EGFR pathway
Role of LAT2/NTAL/LAB on calcium mobilization pathway
Innate Immune System pathway
Signaling by ERBB4 pathway
Signaling by SCF-KIT pathway
Post-transcriptional silencing by small RNAs pathway
Fc epsilon receptor (FCERI) signaling pathway
Signal Transduction pathway
Pre-NOTCH Transcription and Translation pathway
Adaptive Immune System pathway
Immune System pathway
Downstream signal transduction pathway
Cellular Senescence pathway
NGF signalling via TRKA from the plasma membrane pathway
Signaling by NOTCH pathway
PI3K/AKT Signaling in Cancer pathway
Signaling by FGFR pathway
PIP3 activates AKT signaling pathway
Signaling by PDGF pathway
Signaling by ERBB2 pathway
Signaling by the B Cell Receptor (BCR) pathway
GAB1 signalosome pathway
Oxidative Stress Induced Senescence pathway
Downstream signaling events of B Cell Receptor (BCR) pathway
Gene Expression pathway
Disease pathway
PI3K events in ERBB4 signaling pathway
DAP12 interactions pathway
Regulatory RNA pathways pathway
KEGG
INOH
PID BIOCARTA
PID NCI
Cross-References
SwissProt Q9UPQ9
TrEMBL A0A024R1N5 A0A024R1T4 B0QYM5 B4E231
UniProt Splice Variant
Entrez Gene 23112
UniGene Hs.372082 Hs.596407 Hs.602717 Hs.604403 Hs.609153 Hs.618125 Hs.624232 Hs.629307 Hs.710774
RefSeq NM_001024843 NM_001162501 NM_015088
HUGO HGNC:29190
OMIM 610740
CCDS CCDS46712 CCDS46713 CCDS54533
HPRD
IMGT
EMBL AB029016 AK294519 AK304087 AL022238 AL031589 AL033547 BC028626 CH471095 Z83847 Z93783
GenPept AAH28626 BAA83045 BAG57731 BAG64993 CAQ07207 CAQ07209 CAQ08008 CAQ08010 CAQ08927 CAQ08932 EAW60367 EAW60368 EAW60369 EAW60371
RNA Seq Atlas 23112