Bos taurus Gene: TNRC6B
Summary
InnateDB Gene IDBG-641788.3
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol TNRC6B
Gene Name trinucleotide repeat-containing gene 6B protein
Synonyms
Species Bos taurus
Ensembl Gene ENSBTAG00000021076
Encoded Proteins
trinucleotide repeat containing 6B
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000100354:
Gene Information
Type Protein coding
Genomic Location Chromosome 5:112043301-112172811
Strand Forward strand
Band
Transcripts
ENSBTAT00000028072 ENSBTAP00000028072
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 24 interaction(s) predicted by orthology.
Predicted by orthology
Total 24 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0000166 nucleotide binding
GO:0005515 protein binding
GO:0044822 poly(A) RNA binding
Biological Process
GO:0031047 gene silencing by RNA
GO:0060213 positive regulation of nuclear-transcribed mRNA poly(A) tail shortening
GO:1900153 positive regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay
Cellular Component
Orthologs
Species
Homo sapiens
Mus musculus
Gene ID
Gene Order
Method
Confidence
Comments
SSD Ortholog
Ortholog supports species divergence
SSD Ortholog
Ortholog supports species divergence
Pathway Predictions based on Human Orthology Data
NETPATH
REACTOME
Signaling by FGFR in disease pathway
Cellular responses to stress pathway
Oncogene Induced Senescence pathway
Signalling by NGF pathway
Signaling by EGFR in Cancer pathway
PI3K/AKT activation pathway
Downstream signaling of activated FGFR pathway
Ca2+ pathway pathway
Pre-NOTCH Expression and Processing pathway
beta-catenin independent WNT signaling pathway
PI-3K cascade pathway
PI3K events in ERBB2 signaling pathway
DAP12 signaling pathway
Signaling by Wnt pathway
Signaling by EGFR pathway
Role of LAT2/NTAL/LAB on calcium mobilization pathway
Innate Immune System pathway
Signaling by ERBB4 pathway
Signaling by SCF-KIT pathway
Post-transcriptional silencing by small RNAs pathway
Fc epsilon receptor (FCERI) signaling pathway
Signal Transduction pathway
Pre-NOTCH Transcription and Translation pathway
Adaptive Immune System pathway
Immune System pathway
Downstream signal transduction pathway
Cellular Senescence pathway
NGF signalling via TRKA from the plasma membrane pathway
Signaling by NOTCH pathway
PI3K/AKT Signaling in Cancer pathway
Signaling by FGFR pathway
PIP3 activates AKT signaling pathway
Signaling by PDGF pathway
Signaling by ERBB2 pathway
Signaling by the B Cell Receptor (BCR) pathway
GAB1 signalosome pathway
Oxidative Stress Induced Senescence pathway
Downstream signaling events of B Cell Receptor (BCR) pathway
Gene Expression pathway
Disease pathway
PI3K events in ERBB4 signaling pathway
DAP12 interactions pathway
Regulatory RNA pathways pathway
Post-transcriptional silencing by small RNAs pathway
Gene Expression pathway
Regulatory RNA pathways pathway
KEGG
INOH
PID BIOCARTA
PID NCI
Cross-References
SwissProt
TrEMBL F1MY06
UniProt Splice Variant
Entrez Gene 528167
UniGene Bt.41131 Bt.86686
RefSeq NM_001192655 XM_005207401
HUGO HGNC:29190
OMIM
CCDS
HPRD
IMGT
EMBL DAAA02014709
GenPept
RNA Seq Atlas 528167
Transcript Frequencies
Tag Count based mRNA-Abundances across 87 different Tissues (TPM).

Based on Data from Bovine Gene Atlas

Tag Count based mRNA-Abundances across 87 different Tissues (TPM)

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