Version 5.4
Mus musculus Gene: Wdhd1
Summary
InnateDB Gene IDBG-154219.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Wdhd1
Gene Name WD repeat and HMG-box DNA binding protein 1
Synonyms
Species Mus musculus
Ensembl Gene ENSMUSG00000037572
Encoded Proteins
IDBP-257356
WD repeat and HMG-box DNA binding protein 1
IDBP-257358
WD repeat and HMG-box DNA binding protein 1
IDBP-257360
WD repeat and HMG-box DNA binding protein 1
IDBP-789471
WD repeat and HMG-box DNA binding protein 1
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000198554:
The protein encoded by this gene contains multiple N-terminal WD40 domains and a C-terminal high mobility group (HMG) box. WD40 domains are found in a variety of eukaryotic proteins and may function as adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly. HMG boxes are found in many eukaryotic proteins involved in chromatin assembly, transcription and replication. Alternative splicing results in two transcript variants encoding different isoforms. [provided by RefSeq, Jul 2008]
Gene Information
Type Protein coding
Genomic Location Chromosome 14:47240944-47276857
Strand Reverse strand
Band C1
Transcripts
ENSMUST00000111792 ENSMUSP00000107422
ENSMUST00000111791 ENSMUSP00000107421
ENSMUST00000111790 ENSMUSP00000107420
ENSMUST00000139124
ENSMUST00000187531 ENSMUSP00000141182
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 1 experimentally validated interaction(s) in this database.
They are also associated with 14 interaction(s) predicted by orthology.
Experimentally validated
Total 1 [view]
Protein-Protein 1 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 14 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003677 DNA binding
GO:0003682 chromatin binding
GO:0003723 RNA binding
GO:0005515 protein binding
GO:0070063 RNA polymerase binding
Biological Process
GO:0006396 RNA processing
GO:0033044 regulation of chromosome organization
GO:0070829 heterochromatin maintenance
Cellular Component
GO:0000775 chromosome, centromeric region
GO:0005634 nucleus
GO:0005654 nucleoplasm
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000198554
View Gene Order
ENSBTAG00000019120
Not yet available
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene
RefSeq NM_172598 XM_006518830
OMIM
CCDS
HPRD
IMGT
MGI ID
MGI Symbol
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca