Version 5.4
Homo sapiens Protein: SMARCB1
Summary
InnateDB Protein IDBP-2588.5
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol SMARCB1
Protein Name SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1
Synonyms BAF47; hSNFS; INI1; MRD15; PPP1R144; RDT; RTPS1; Sfh1p; SNF5; SNF5L1; Snr1; SWNTS1;
Species Homo sapiens
Ensembl Protein ENSP00000340883
InnateDB Gene IDBG-2584 (SMARCB1)
Protein Structure
UniProt Annotation
Function
Subcellular Localization
Disease Associations
Tissue Specificity
Comments
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 187 experimentally validated interaction(s) in this database.
They are also associated with 16 interaction(s) predicted by orthology.
Experimentally validated
Total 187 [view]
Protein-Protein 174 [view]
Protein-DNA 10 [view]
Protein-RNA 0
DNA-DNA 3 [view]
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 16 [view]
Gene Ontology

Molecular Function
Accession GO Term
Biological Process
GO:0006338 chromatin remodeling
Cellular Component
GO:0000228 nuclear chromosome
GO:0005634 nucleus
GO:0005730 nucleolus
Protein Structure and Domains
PDB ID
InterPro IPR006939 SNF5/SMARCB1/INI1
IPR017393 SWI/SNF chromatin-remodeling complex, component hSNF5/Ini1
PFAM PF04855
PRINTS
PIRSF PIRSF038126
SMART
TIGRFAMs
Post-translational Modifications
Modification
Cross-References
SwissProt
PhosphoSite PhosphoSite-
TrEMBL G5E975
UniProt Splice Variant
Entrez Gene 6598
UniGene Hs.534350
RefSeq
HUGO HGNC:11103
OMIM 601607
CCDS
HPRD 03364
IMGT
EMBL AP000349 AP000350 CH471095
GenPept EAW59607

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca