Version 5.4
Homo sapiens Protein: CHODL
Summary
InnateDB Protein IDBP-228956.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol CHODL
Protein Name chondrolectin
Synonyms
Species Homo sapiens
Ensembl Protein ENSP00000382992
InnateDB Gene IDBG-947 (CHODL)
Protein Structure
UniProt Annotation
Function
Subcellular Localization Cytoplasm {ECO:0000269PubMed:22042635}. Membrane {ECO:0000305}; Single-pass type I membrane protein {ECO:0000305}.
Disease Associations
Tissue Specificity Found in spleen, testis, prostate and fetal liver. Expression limited to vascular muscle of testis, smooth muscle of prostate stroma, heart muscle, skeletal muscle, crypts of small intestine, and red pulp of spleen. {ECO:0000269PubMed:11707072, ECO:0000269PubMed:12079284}.
Comments
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 1 experimentally validated interaction(s) in this database.
Experimentally validated
Total 1 [view]
Protein-Protein 0
Protein-DNA 0
Protein-RNA 0
DNA-DNA 1 [view]
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0030246 carbohydrate binding
Biological Process
GO:0007517 muscle organ development
Cellular Component
GO:0005737 cytoplasm
GO:0016021 integral component of membrane
GO:0048471 perinuclear region of cytoplasm
Protein Structure and Domains
PDB ID
InterPro IPR001304 C-type lectin
IPR016187 C-type lectin fold
PFAM PF00059
PRINTS
PIRSF
SMART SM00034
TIGRFAMs
Post-translational Modifications
Modification
Cross-References
SwissProt Q9H9P2
PhosphoSite PhosphoSite-Q9H9P2
TrEMBL
UniProt Splice Variant
Entrez Gene 140578
UniGene Hs.283725
RefSeq NP_001191105
HUGO HGNC:17807
OMIM 607247
CCDS CCDS56209
HPRD 06261
IMGT
EMBL AF130417 AF257472 AF523313 AF523314 AF523315 AK022689 AK296009 AK313725 AL078474 AL109761 AL163217 AP000404 AP000656 AP000745 AP000998 AY358608 BC009418 CH471079
GenPept AAH09418 AAL05981 AAP43902 AAP43903 AAP43904 AAQ88971 BAB14181 BAG36467 BAG58780 CAB90388 EAX10018

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca