Version 5.4
Homo sapiens Gene: RPAP1
Summary
InnateDB Gene IDBG-7174.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol RPAP1
Gene Name RNA polymerase II associated protein 1
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000103932
Encoded Proteins
IDBP-7176
RNA polymerase II associated protein 1
IDBP-747677
IDBP-747186
IDBP-747267
IDBP-746617
IDBP-747561
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This protein forms part of the RNA polymerase II (RNAPII) enzyme complex and may recruit RNAPII to chromatin through its interaction with acetylated histones. [provided by RefSeq, Jul 2012]
Gene Information
Type Protein coding
Genomic Location Chromosome 15:41517176-41544269
Strand Reverse strand
Band q15.1
Transcripts
ENST00000304330 ENSP00000306123
ENST00000564934
ENST00000562303 ENSP00000455363
ENST00000565035 ENSP00000457203
ENST00000566863 ENSP00000455527
ENST00000563293
ENST00000565167
ENST00000567866 ENSP00000455381
ENST00000561631
ENST00000561603 ENSP00000456207
ENST00000568413
ENST00000569829
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 40 experimentally validated interaction(s) in this database.
Experimentally validated
Total 40 [view]
Protein-Protein 40 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0003677 DNA binding
GO:0003899 DNA-directed RNA polymerase activity
GO:0005488 binding
Biological Process
GO:0032774 RNA biosynthetic process
Cellular Component
GO:0005634 nucleus
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000034032
View Gene Order
ENSBTAG00000001693
Not yet available
Pathways
NETPATH
NetPath_24
TSLP pathway
REACTOME
KEGG
INOH
PID NCI
Cross-References
SwissProt
TrEMBL H3BPM3 H3BPY8 H3BRE8
UniProt Splice Variant
Entrez Gene 26015
UniGene Hs.371045 Hs.613684
RefSeq NM_015540 XM_005254297 XM_006720470
HUGO HGNC:24567
OMIM 611475
CCDS CCDS10079
HPRD 11522
IMGT
EMBL AC016134
GenPept
RNA Seq Atlas 102724088 26015

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca