Version 5.4
Homo sapiens Gene: TXNL4A
Summary
InnateDB Gene IDBG-5631.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol TXNL4A
Gene Name thioredoxin-like 4A
Synonyms DIB1; DIM1; HsT161; SNRNP15; TXNL4; U5-15kD
Species Homo sapiens
Ensembl Gene ENSG00000141759
Encoded Proteins
IDBP-5633
thioredoxin-like 4A
IDBP-5635
thioredoxin-like 4A
IDBP-725874
IDBP-726479
IDBP-726596
IDBP-726181
IDBP-725963
IDBP-726950
IDBP-726989
IDBP-726859
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 18:79970811-80033949
Strand Reverse strand
Band q23
Transcripts
ENST00000269601 ENSP00000269601
ENST00000355491 ENSP00000347678
ENST00000592957 ENSP00000465493
ENST00000585474 ENSP00000465572
ENST00000591711 ENSP00000468493
ENST00000586612
ENST00000589926
ENST00000585769 ENSP00000466266
ENST00000586295 ENSP00000466694
ENST00000592837 ENSP00000468761
ENST00000588162 ENSP00000465321
ENST00000586825 ENSP00000467304
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 12 experimentally validated interaction(s) in this database.
Experimentally validated
Total 12 [view]
Protein-Protein 12 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0005515 protein binding
Biological Process
GO:0000245 spliceosomal complex assembly
GO:0000375 RNA splicing, via transesterification reactions
GO:0000398 mRNA splicing, via spliceosome
GO:0007067 mitotic nuclear division
GO:0008380 RNA splicing
GO:0010467 gene expression
GO:0045454 cell redox homeostasis
Cellular Component
GO:0005634 nucleus
GO:0005654 nucleoplasm
GO:0005681 spliceosomal complex
GO:0005737 cytoplasm
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000057130
View Gene Order
ENSBTAG00000013587
Not yet available
Pathways
NETPATH
REACTOME
REACT_467
mRNA Splicing - Major Pathway pathway
REACT_1753
mRNA Splicing - Minor Pathway pathway
REACT_125
Processing of Capped Intron-Containing Pre-mRNA pathway
REACT_1735
mRNA Splicing pathway
REACT_71
Gene Expression pathway
KEGG
hsa03040
Spliceosome pathway
INOH
PID NCI
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene
RefSeq NM_006701
HUGO
OMIM
CCDS CCDS32852
HPRD 18252
IMGT
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca