Version 5.4
Homo sapiens Gene: GDE1
Summary
InnateDB Gene IDBG-17765.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol GDE1
Gene Name glycerophosphodiester phosphodiesterase 1
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000006007
Encoded Proteins
IDBP-17769
glycerophosphodiester phosphodiesterase 1
IDBP-749455
IDBP-748691
IDBP-749198
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 16:19501689-19522145
Strand Reverse strand
Band p12.3
Transcripts
ENST00000353258 ENSP00000261386
ENST00000569773 ENSP00000454755
ENST00000563645
ENST00000569899 ENSP00000456295
ENST00000564172 ENSP00000457431
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 5 experimentally validated interaction(s) in this database.
Experimentally validated
Total 5 [view]
Protein-Protein 3 [view]
Protein-DNA 2 [view]
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0008081 phosphoric diester hydrolase activity
GO:0008889 glycerophosphodiester phosphodiesterase activity
GO:0046872 metal ion binding
GO:0047395 glycerophosphoinositol glycerophosphodiesterase activity
Biological Process
GO:0006071 glycerol metabolic process
GO:0006629 lipid metabolic process
Cellular Component
GO:0005737 cytoplasm
GO:0016021 integral component of membrane
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000033917
View Gene Order
ENSBTAG00000002101
Not yet available
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Hs.512607 Hs.598067 Hs.623801
RefSeq NM_016641 XM_005255355
HUGO
OMIM
CCDS CCDS10578
HPRD 12070
IMGT
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca