Version 5.4
Homo sapiens Gene: PHRF1
Summary
InnateDB Gene IDBG-17186.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol PHRF1
Gene Name PHD and ring finger domains 1
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000070047
Encoded Proteins
IDBP-17188
PHD and ring finger domains 1
IDBP-360678
PHD and ring finger domains 1
IDBP-360679
PHD and ring finger domains 1
IDBP-588580
PHD and ring finger domains 1
IDBP-594844
PHD and ring finger domains 1
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 11:576486-612222
Strand Forward strand
Band p15.5
Transcripts
ENST00000264555 ENSP00000264555
ENST00000416188 ENSP00000410626
ENST00000413872 ENSP00000388589
ENST00000534320 ENSP00000435360
ENST00000533464 ENSP00000431870
ENST00000532550
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 5 experimentally validated interaction(s) in this database.
Experimentally validated
Total 5 [view]
Protein-Protein 5 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0005515 protein binding
GO:0008270 zinc ion binding
GO:0019904 protein domain specific binding
GO:0046872 metal ion binding
GO:0070063 RNA polymerase binding
Biological Process
GO:0006366 transcription from RNA polymerase II promoter
GO:0006397 mRNA processing
Cellular Component
GO:0016020 membrane
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000038611
View Gene Order
ENSBTAG00000046359
Not yet available
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Hs.325838
RefSeq NM_001286581 NM_001286582 NM_001286583 NM_020901
HUGO
OMIM
CCDS CCDS44507 CCDS65987 CCDS65988 CCDS65989
HPRD 13870
IMGT
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca