Version 5.4
Homo sapiens Gene: RBM47
Summary
InnateDB Gene IDBG-14977.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol RBM47
Gene Name RNA binding motif protein 47
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000163694
Encoded Proteins
IDBP-14979
RNA binding motif protein 47
IDBP-14981
RNA binding motif protein 47
IDBP-14985
RNA binding motif protein 47
IDBP-477237
RNA binding motif protein 47
IDBP-479046
RNA binding motif protein 47
IDBP-480324
RNA binding motif protein 47
IDBP-473732
RNA binding motif protein 47
IDBP-481316
RNA binding motif protein 47
IDBP-482060
RNA binding motif protein 47
IDBP-473670
RNA binding motif protein 47
IDBP-484742
RNA binding motif protein 47
IDBP-475874
RNA binding motif protein 47
IDBP-476281
RNA binding motif protein 47
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 4:40423267-40630875
Strand Reverse strand
Band p14
Transcripts
ENST00000381795 ENSP00000371214
ENST00000381793 ENSP00000371212
ENST00000295971 ENSP00000295971
ENST00000510871 ENSP00000422945
ENST00000514014 ENSP00000423243
ENST00000515809
ENST00000515053 ENSP00000422564
ENST00000513473 ENSP00000421589
ENST00000505414 ENSP00000423527
ENST00000514782 ENSP00000426542
ENST00000507180 ENSP00000423398
ENST00000511598 ENSP00000424019
ENST00000511902 ENSP00000425111
ENST00000505220 ENSP00000425507
ENST00000513044
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 2 experimentally validated interaction(s) in this database.
Experimentally validated
Total 2 [view]
Protein-Protein 2 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0000166 nucleotide binding
GO:0003676 nucleic acid binding
GO:0044822 poly(A) RNA binding
Biological Process
GO:0002244 hematopoietic progenitor cell differentiation
Cellular Component
GO:0005634 nucleus
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000070780
View Gene Order
ENSBTAG00000002356
Not yet available
Cross-References
SwissProt
TrEMBL B7Z8Z7
UniProt Splice Variant
Entrez Gene 54502
UniGene Hs.518727 Hs.602477 Hs.644925 Hs.707061
RefSeq NM_001098634 NM_019027 XM_005248103 XM_005248107 XM_005248108 XM_005248109 XM_005248110 XM_005248111
HUGO HGNC:30358
OMIM
CCDS CCDS3460 CCDS43223
HPRD
IMGT
EMBL AC098869 AC112717 AK304206
GenPept BAH14133
RNA Seq Atlas 54502

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca