Version 5.4
Homo sapiens Gene: SRRM2
Summary
InnateDB Gene IDBG-10878.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol SRRM2
Gene Name serine/arginine repetitive matrix 2
Synonyms 300-KD; Cwc21; CWF21; SRL300; SRm300
Species Homo sapiens
Ensembl Gene ENSG00000167978
Encoded Proteins
IDBP-10880
serine/arginine repetitive matrix 2
IDBP-750313
IDBP-812463
serine/arginine repetitive matrix 2
IDBP-752149
IDBP-754199
IDBP-745551
IDBP-745401
IDBP-753617
IDBP-752625
IDBP-745487
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 16:2752329-2772538
Strand Forward strand
Band p13.3
Transcripts
ENST00000301740 ENSP00000301740
ENST00000573692 ENSP00000461535
ENST00000570971 ENSP00000484503
ENST00000574331
ENST00000575870
ENST00000571378 ENSP00000458647
ENST00000570539 ENSP00000459157
ENST00000571372
ENST00000576076
ENST00000573451
ENST00000573311
ENST00000576674
ENST00000570705
ENST00000576924 ENSP00000461181
ENST00000575701
ENST00000572721
ENST00000571041
ENST00000572278
ENST00000576415 ENSP00000458718
ENST00000570655
ENST00000572883 ENSP00000460642
ENST00000575009 ENSP00000458870
ENST00000573583
ENST00000574866
ENST00000576894
ENST00000573498
ENST00000574593
ENST00000574340 ENSP00000458230
ENST00000576878
ENST00000572952
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 227 experimentally validated interaction(s) in this database.
They are also associated with 2 interaction(s) predicted by orthology.
Experimentally validated
Total 227 [view]
Protein-Protein 224 [view]
Protein-DNA 3 [view]
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 2 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0044822 poly(A) RNA binding
GO:0047485 protein N-terminus binding
GO:0070742 C2H2 zinc finger domain binding
Biological Process
GO:0000398 mRNA splicing, via spliceosome
Cellular Component
GO:0005634 nucleus
GO:0015030 Cajal body
GO:0016607 nuclear speck
GO:0071013 catalytic step 2 spliceosome
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000039218
View Gene Order
ENSBTAG00000012683
Not yet available
Pathways
NETPATH
NetPath_24
TSLP pathway
REACTOME
KEGG
INOH
PID NCI
Cross-References
SwissProt Q9UQ35
TrEMBL I3L0N7 I3L182 I3L1C0 I3L1I8 I3L4D8
UniProt Splice Variant
Entrez Gene 23524
UniGene Hs.433343 Hs.728409
RefSeq NM_016333 XM_005255225 XM_005255226 XM_005255227 XM_006720872 XM_006720873
HUGO HGNC:16639
OMIM 606032
CCDS CCDS32373
HPRD 06913
IMGT
EMBL AB002322 AB015644 AB016087 AB016089 AB016090 AB016091 AB016092 AC092117 AF161338 AF201422 BC007752 BC009062 BC041155 BC070050 CH471112
GenPept AAF21439 AAF28898 AAH07752 AAH09062 AAH41155 AAH70050 BAA20782 BAA34957 BAA83713 BAA83715 BAA83716 BAA83717 BAA83718 EAW85477 EAW85478 EAW85480
RNA Seq Atlas 23524

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca